STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26794.1Hypothetical protein. (34 aa)    
Predicted Functional Partners:
AGA26795.1
PFAM: O-Antigen ligase.
       0.757
AGA26791.1
PFAM: Glycosyl transferase family 2.
       0.615
AGA26792.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.615
AGA26793.1
PFAM: Glycosyl transferase family 2.
       0.615
AGA26788.1
Acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
       0.564
AGA26789.1
TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC.
       0.564
AGA26790.1
Hypothetical protein; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.564
AGA26796.1
PFAM: Protein of unknown function (DUF3485); manually curated.
       0.520
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.