STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26862.1Thioredoxin domain protein; PFAM: Protein of unknown function, DUF255. (334 aa)    
Predicted Functional Partners:
AGA25080.1
Hypothetical protein.
  
   0.584
AGA28968.1
Hypothetical protein.
  
 
   0.564
AGA25137.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
   0.531
AGA26191.1
Hypothetical protein.
   
   0.531
AGA26646.1
Hypothetical protein.
   
   0.531
AGA26813.1
Hypothetical protein.
   
   0.531
AGA27064.1
Hypothetical protein.
   
   0.531
AGA26863.1
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; PFAM: TROVE domain.
 
     0.517
AGA26745.1
alpha-L-rhamnosidase family protein; PFAM: Alpha-L-rhamnosidase N-terminal domain.
   
   0.490
AGA26111.1
Hypothetical protein.
  
 
   0.481
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.