STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26905.1Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. (301 aa)    
Predicted Functional Partners:
AGA27116.1
Dienelactone hydrolase-like enzyme.
  
     0.654
AGA26758.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
     0.606
AGA25857.1
Prolyl oligopeptidase family protein.
  
     0.595
AGA27384.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.591
AGA31021.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; Acetyl xylan esterase (AXE1); PKD domain.
 
   
 0.581
AGA27247.1
Hypothetical protein.
  
     0.574
AGA26427.1
Hypothetical protein.
  
     0.570
AGA26426.1
Hypothetical protein.
  
     0.566
AGA29317.1
Hypothetical protein.
  
     0.533
AGA25959.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
 
     0.525
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.