STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27057.1Putative membrane-bound dehydrogenase; PFAM: Cytochrome c; Trehalose utilisation; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type. (1446 aa)    
Predicted Functional Partners:
AGA27913.1
Fe-S-cluster-containing hydrogenase subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.904
AGA30753.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome c; Cytochrome b(C-terminal)/b6/petD.
  
 0.898
AGA29915.1
Cytochrome c1; PFAM: PA14 domain.
 
 0.890
nuoB-2
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
 
 0.803
AGA29916.1
Glucose/sorbosone dehydrogenase.
  
     0.760
AGA29307.1
Glucose/sorbosone dehydrogenase.
  
     0.749
AGA26194.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 0.722
AGA30752.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 0.722
AGA26131.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.720
AGA26122.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
 
  
 0.718
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.