STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27120.1PFAM: Bacterial lipid A biosynthesis acyltransferase. (323 aa)    
Predicted Functional Partners:
AGA31467.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
  
  
 
0.914
AGA26562.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
  
  
 
0.906
AGA25537.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
     0.600
AGA26277.1
Phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase.
 
  
 0.590
AGA27843.1
Hypothetical protein.
  
     0.587
AGA26115.1
Hypothetical protein.
  
     0.573
AGA26185.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.553
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
  
     0.542
AGA27245.1
Phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.535
AGA25824.1
Hypothetical protein.
  
     0.534
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.