STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27341.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
AGA26980.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
  
     0.711
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
  
     0.704
AGA29223.1
Hypothetical protein.
  
     0.679
AGA27843.1
Hypothetical protein.
  
     0.674
AGA26630.1
Hypothetical protein.
  
     0.673
AGA31304.1
Hypothetical protein.
  
     0.665
AGA25824.1
Hypothetical protein.
  
     0.656
AGA31574.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: MatE.
  
     0.652
AGA25346.1
Hypothetical protein.
  
     0.647
AGA29722.1
Hypothetical protein.
  
     0.647
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.