STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27343.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (388 aa)    
Predicted Functional Partners:
AGA30003.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.739
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.720
AGA29535.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.619
AGA25885.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.613
AGA27378.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.587
AGA30008.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.572
AGA25888.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.571
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
    0.512
AGA31220.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.503
AGA30679.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.496
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.