STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27501.1PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type. (970 aa)    
Predicted Functional Partners:
AGA30753.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome c; Cytochrome b(C-terminal)/b6/petD.
  
 0.914
AGA27913.1
Fe-S-cluster-containing hydrogenase subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.906
AGA29915.1
Cytochrome c1; PFAM: PA14 domain.
  
 0.883
nuoB-2
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
 
 0.851
AGA27502.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
     0.798
AGA31102.1
PFAM: Trehalose utilisation.
     0.754
AGA26885.1
PFAM: Planctomycete cytochrome C.
 
    0.753
AGA29307.1
Glucose/sorbosone dehydrogenase.
  
     0.752
AGA26194.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 0.738
AGA30752.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 0.738
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.