STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27526.1PFAM: Plasmid stabilisation system protein. (107 aa)    
Predicted Functional Partners:
AGA27527.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
 
 
 0.969
AGA25379.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
 
 
 0.943
AGA24818.1
Hypothetical protein.
  
 
 0.802
AGA31592.1
PFAM: Protein of unknown function (DUF820).
  
     0.680
AGA28849.1
PFAM: HNH endonuclease; manually curated.
 
     0.560
AGA27500.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.492
AGA27710.1
PFAM: Protein of unknown function (DUF3124).
  
     0.436
AGA29821.1
PFAM: Protein of unknown function (DUF3124).
  
     0.435
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.