STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27549.1Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase. (247 aa)    
Predicted Functional Partners:
AGA29416.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase.
  
  
 
0.927
AGA27550.1
Mg2+ transporter MgtE; Acts as a magnesium transporter.
       0.757
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.608
AGA27552.1
Hypothetical protein.
       0.454
AGA25421.1
PFAM: Glycosyl transferase family 2.
  
  
 0.437
AGA25638.1
Cellobiose phosphorylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family.
  
  
 0.437
AGA26668.1
PFAM: Glycosyl transferase family 2.
  
  
 0.437
AGA26778.1
PFAM: Glycosyl transferase family 2.
  
  
 0.437
AGA27005.1
PFAM: Glycosyl transferase family 2.
  
  
 0.437
AGA27006.1
PFAM: Glycosyl transferase family 2.
  
  
 0.437
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.