STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27675.1PFAM: Protein of unknown function (DUF1557). (672 aa)    
Predicted Functional Partners:
AGA26461.1
Hypothetical protein.
  
 
   0.788
AGA25346.1
Hypothetical protein.
  
 
   0.769
AGA26108.1
Hypothetical protein.
  
 
   0.761
AGA29513.1
Hypothetical protein.
 
   0.754
AGA29349.1
Hypothetical protein.
  
     0.745
AGA26200.1
Hypothetical protein.
 
     0.738
AGA28204.1
Hypothetical protein.
 
   0.737
AGA31572.1
Hypothetical protein.
  
     0.733
AGA29215.1
Type IV secretory pathway, VirB10 component; PFAM: Protein of unknown function (DUF1570).
  
     0.732
AGA27708.1
Hypothetical protein.
 
     0.721
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.