STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27685.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
AGA29946.1
PFAM: Calcineurin-like phosphoesterase.
   
 0.902
htpG
Molecular chaperone of HSP90 family; Molecular chaperone. Has ATPase activity.
  
 0.876
AGA28195.1
Hypothetical protein.
   
 0.848
AGA28780.1
PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain.
   
 0.848
guaB
Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 0.797
AGA28366.1
PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family.
   
 0.787
AGA28256.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain.
   
 0.738
AGA27698.1
Hypothetical protein.
    
 0.725
AGA29397.1
PFAM: Protein of unknown function (DUF1570).
    
 0.725
AGA30028.1
Hypothetical protein.
    
 0.725
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.