STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27717.1PFAM: Heparinase II/III-like protein. (884 aa)    
Predicted Functional Partners:
AGA31258.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
  
     0.702
AGA27116.1
Dienelactone hydrolase-like enzyme.
  
     0.659
AGA27502.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.548
AGA25085.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
  
     0.528
AGA26732.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.524
AGA25086.1
PFAM: NAD dependent epimerase/dehydratase family.
  
     0.495
AGA31211.1
Neutral/alkaline non-lysosomal ceramidase.
  
     0.492
AGA30425.1
Mannose-6-phosphate isomerase; PFAM: Cupin domain.
  
     0.457
AGA25532.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.441
AGA25857.1
Prolyl oligopeptidase family protein.
  
     0.422
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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