STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27732.1Uncharacterized secreted protein; PFAM: Protein of unknown function (DUF1223). (280 aa)    
Predicted Functional Partners:
AGA25068.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
  
     0.551
AGA27731.1
PFAM: Predicted membrane protein (DUF2127).
       0.539
AGA30854.1
Tetratricopeptide repeat protein.
  
     0.462
AGA25824.1
Hypothetical protein.
  
     0.453
AGA26624.1
Hypothetical protein.
  
     0.449
AGA30425.1
Mannose-6-phosphate isomerase; PFAM: Cupin domain.
  
     0.447
AGA28764.1
Nuclease-like protein; PFAM: Nuclease-related domain.
  
     0.446
AGA28410.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.444
AGA29273.1
Hypothetical protein.
  
     0.438
AGA29722.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.