STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27835.1PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase. (594 aa)    
Predicted Functional Partners:
AGA26293.1
PFAM: FG-GAP repeat.
  
     0.712
AGA31494.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.678
AGA25924.1
Hypothetical protein.
  
     0.677
AGA29223.1
Hypothetical protein.
  
     0.670
AGA26725.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.654
AGA26012.1
Hypothetical protein.
 
     0.652
AGA25552.1
PFAM: Protein kinase domain; Archaeal ATPase.
  
     0.651
AGA27438.1
PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.648
AGA29502.1
Hypothetical protein.
  
    0.645
AGA27511.1
Hypothetical protein.
  
     0.633
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.