STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27946.1Putative transcriptional regulator; PFAM: DNA methylase; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins. (479 aa)    
Predicted Functional Partners:
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
 
  
 0.800
AGA26089.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.756
AGA29008.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.749
AGA24469.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.694
AGA29996.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
 
     0.691
AGA31467.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
  
   
 0.688
AGA25537.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
     0.672
AGA25824.1
Hypothetical protein.
 
     0.665
AGA31574.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: MatE.
  
     0.660
AGA26200.1
Hypothetical protein.
  
    0.654
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.