STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27998.1DNA-binding domain-containing protein, AraC-type. (273 aa)    
Predicted Functional Partners:
AGA24496.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.761
AGA27997.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase; Domain of unknown function (DUF3471).
       0.489
AGA30835.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
  
     0.488
AGA30386.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
  
     0.471
AGA29928.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
  
     0.462
AGA25486.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
  
     0.422
AGA27999.1
Exopolyphosphatase-like enzyme; PFAM: DHH family; DHHA1 domain.
       0.415
AGA29636.1
DNA-binding domain-containing protein, AraC-type; PFAM: AraC-type transcriptional regulator N-terminus.
  
     0.403
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.