STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA27999.1Exopolyphosphatase-like enzyme; PFAM: DHH family; DHHA1 domain. (357 aa)    
Predicted Functional Partners:
AGA26908.1
Hypothetical protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding.
   
 0.740
AGA24890.1
PFAM: Ribosome-binding factor A.
  
    0.620
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
    0.620
AGA31535.1
Hypothetical protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding.
   
 0.587
AGA26998.1
Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
 
     0.553
AGA28793.1
PFAM: CBS domain; Voltage gated chloride channel.
 
     0.480
AGA28000.1
Putative integral membrane protein.
       0.476
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
    0.453
AGA27998.1
DNA-binding domain-containing protein, AraC-type.
       0.415
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
 
     0.400
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.