STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28017.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (257 aa)    
Predicted Functional Partners:
AGA28016.1
Hypothetical protein.
       0.787
AGA28015.1
Putative aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
 
 
   0.593
AGA25854.1
ABC-type multidrug transport system, permease component.
 
  
 0.508
AGA27313.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
    
0.508
AGA29137.1
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component; PFAM: ABC-type uncharacterized transport system.
  
 
 0.506
AGA25169.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
  
     0.453
AGA25939.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter.
  
  0.441
AGA28018.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
   
   0.437
AGA30629.1
Hypothetical protein.
  
   0.431
AGA28019.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
       0.416
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.