STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28065.1Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. (299 aa)    
Predicted Functional Partners:
AGA24696.1
Cysteine desulfurase family protein; PFAM: Aminotransferase class-V.
   
 0.910
AGA27827.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 0.910
AGA31242.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme.
  
 
 0.909
AGA26167.1
Sulfite oxidase-like oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain.
    
 0.908
AGA29057.1
Sulfite reductase, beta subunit (hemoprotein); PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: ferredoxin-sulfite reductase.
    
 0.908
cysH
Thioredoxin-dependent phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.908
AGA29882.1
PFAM: Putative Fe-S cluster; FAD binding domain; Oxidoreductase NAD-binding domain.
    
 0.905
AGA26135.1
PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
   
 
  0.903
AGA25771.1
PFAM: Aminotransferase class I and II.
     
 0.901
AGA24986.1
PFAM: 56kDa selenium binding protein (SBP56).
  
  
  0.823
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.