STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28185.1Putative membrane protein; PFAM: Catalase; Protein of unknown function (DUF1304). (469 aa)    
Predicted Functional Partners:
AGA31480.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 
 0.855
AGA24687.1
Acyl dehydratase; PFAM: MaoC like domain.
   
 0.813
AGA26214.1
Acyl dehydratase; PFAM: MaoC like domain.
   
 0.813
AGA30711.1
Sulfite reductase, alpha subunit (flavoprotein); PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; Cytochrome P450.
 
 
 0.753
AGA25965.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.647
AGA27665.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.647
AGA28109.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
  
  
 0.647
AGA29562.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.647
AGA29809.1
acyl-CoA dehydrogenase.
  
 0.647
AGA29882.1
PFAM: Putative Fe-S cluster; FAD binding domain; Oxidoreductase NAD-binding domain.
    
 0.639
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.