STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28186.1Hypothetical protein. (625 aa)    
Predicted Functional Partners:
AGA31269.1
PFAM: Protein of unknown function (DUF3386).
  
     0.688
AGA26425.1
Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat.
  
     0.681
AGA27628.1
Hypothetical protein.
  
     0.664
AGA31511.1
PFAM: Phosphate-selective porin O and P.
  
     0.656
AGA27872.1
Hypothetical protein.
  
     0.615
AGA26427.1
Hypothetical protein.
  
     0.598
AGA26426.1
Hypothetical protein.
  
     0.568
AGA29872.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: Domain of unknown function (DUF477).
  
     0.563
AGA31277.1
Hypothetical protein.
  
     0.550
AGA27204.1
PFAM: Protein of unknown function (DUF1570).
  
     0.534
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.