STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28188.1PFAM: Protein of unknown function DUF124. (365 aa)    
Predicted Functional Partners:
AGA26894.1
Hypothetical protein.
  
     0.588
AGA29226.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.550
AGA28187.1
TIGRFAM: TIGR03032 family protein.
       0.547
AGA29336.1
Hypothetical protein.
  
     0.498
AGA24626.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase.
 
     0.473
AGA29970.1
Hypothetical protein.
  
     0.455
AGA31350.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.450
AGA28189.1
Putative aminopeptidase; PFAM: PA domain; Peptidase family M28.
 
     0.423
AGA27926.1
PFAM: Beta-galactosidase trimerisation domain.
  
     0.407
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.