STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28189.1Putative aminopeptidase; PFAM: PA domain; Peptidase family M28. (537 aa)    
Predicted Functional Partners:
AGA25561.1
PFAM: Bacterial protein of unknown function (DUF885).
  
     0.715
AGA30107.1
PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
    0.698
AGA29958.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
  
    0.665
AGA27486.1
PFAM: Bacterial protein of unknown function (DUF885).
  
     0.642
AGA29816.1
PFAM: Leukotriene A4 hydrolase, C-terminal; Peptidase family M1.
  
 
 
 0.635
AGA30256.1
PFAM: Zinc carboxypeptidase.
  
   
 0.580
AGA29957.1
PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial.
 
 
   0.577
AGA25040.1
Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
  
     0.569
AGA25881.1
V8-like Glu-specific endopeptidase; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
 
  
 0.564
AGA31173.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
  
     0.564
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.