STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28194.1PFAM: Protein of unknown function (DUF1501). (455 aa)    
Predicted Functional Partners:
AGA28193.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
 
     0.883
AGA28195.1
Hypothetical protein.
       0.787
AGA27208.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
 
     0.783
AGA25113.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
 
     0.774
AGA25359.1
PA14 domain-containing protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); PA14 domain.
  
     0.770
AGA26756.1
Membrane protein involved in colicin uptake; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.770
AGA30811.1
PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.770
AGA31262.1
Membrane protein involved in colicin uptake; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.770
AGA31532.1
PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.770
AGA27421.1
Multidrug resistance efflux pump; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.769
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.