STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28233.1PFAM: Glycosyl transferase family 2. (550 aa)    
Predicted Functional Partners:
AGA28235.1
Putative deacetylase.
 
     0.808
AGA28234.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
    0.775
AGA26791.1
PFAM: Glycosyl transferase family 2.
  
     0.671
AGA26793.1
PFAM: Glycosyl transferase family 2.
  
     0.546
AGA28133.1
PFAM: Glycosyl transferase family 2.
  
     0.531
AGA26764.1
PFAM: Glycosyl transferase family 2.
  
     0.523
AGA29539.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
     0.489
AGA26668.1
PFAM: Glycosyl transferase family 2.
  
     0.448
AGA25421.1
PFAM: Glycosyl transferase family 2.
  
     0.438
AGA30688.1
PFAM: Glycosyl transferase family 2.
  
     0.427
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.