STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28235.1Putative deacetylase. (240 aa)    
Predicted Functional Partners:
AGA28234.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
     0.856
AGA28233.1
PFAM: Glycosyl transferase family 2.
 
     0.808
AGA27965.1
Caspase domain-containing protein; PFAM: Caspase domain.
  
     0.767
AGA31511.1
PFAM: Phosphate-selective porin O and P.
  
     0.766
AGA24504.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.761
AGA29319.1
PFAM: Phosphate-selective porin O and P.
  
     0.748
AGA30075.1
Hypothetical protein.
  
     0.740
AGA30174.1
Hypothetical protein.
  
     0.734
AGA30180.1
PFAM: Phosphate-selective porin O and P.
  
     0.729
AGA31269.1
PFAM: Protein of unknown function (DUF3386).
  
     0.702
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.