STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28269.1DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family. (160 aa)    
Predicted Functional Partners:
clpS
Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.904
AGA31480.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
  
 0.786
AGA28109.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
  
  
 0.778
AGA28873.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
    0.682
AGA25193.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
  
  
 0.671
AGA30894.1
Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein.
  
  
 0.671
AGA27473.1
LysM domain-containing protein; PFAM: LysM domain.
   
  
 0.613
AGA25662.1
Ribosome-associated protein Y (PSrp-1); PFAM: Sigma 54 modulation protein / S30EA ribosomal protein.
  
    0.594
AGA25669.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein.
  
    0.594
AGA27535.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
    0.594
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.