STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28326.1UTP:GlnB (protein PII) uridylyltransferase; PFAM: HD domain. (212 aa)    
Predicted Functional Partners:
AGA26403.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
     0.744
AGA28327.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family.
 
     0.705
AGA31194.1
PFAM: NAD dependent epimerase/dehydratase family.
  
     0.681
AGA28917.1
Uncharacterized protein, 4-oxalocrotonate tautomerase; PFAM: Tautomerase enzyme.
  
     0.571
AGA24498.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.539
AGA28325.1
Hypothetical protein.
       0.517
AGA24677.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.514
AGA27117.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
 
     0.500
AGA24497.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding; PFAM: Protein of unknown function (DUF1470); CGNR zinc finger.
  
     0.467
AGA31501.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
     0.458
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.