STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28333.1Phosphatidylserine decarboxylase precursor; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (308 aa)    
Predicted Functional Partners:
AGA31189.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Acyltransferase; AMP-binding enzyme; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.934
AGA29574.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
     
 0.906
AGA28331.1
PFAM: Aminotransferase class-III.
  
  
 0.791
AGA28334.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
     
 0.782
AGA28332.1
Hypothetical protein.
       0.779
AGA28330.1
Hypothetical protein.
       0.773
carA
PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
   
    0.457
AGA29836.1
Phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase.
  
  
 0.440
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.