STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28370.1Hypothetical protein. (598 aa)    
Predicted Functional Partners:
AGA29302.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.765
AGA25482.1
Hypothetical protein.
  
     0.746
AGA27109.1
TIGRFAM: conserved hypothetical protein.
  
     0.719
AGA31552.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.714
AGA25195.1
TIGRFAM: conserved hypothetical protein.
  
     0.698
AGA30734.1
TIGRFAM: conserved hypothetical protein.
  
     0.697
AGA31553.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.692
AGA24629.1
HEAT repeat-containing protein.
  
     0.681
AGA27436.1
Hypothetical protein.
  
     0.667
AGA29315.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.667
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.