STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28417.1PFAM: Bifunctional DNA primase/polymerase, N-terminal; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain. (779 aa)    
Predicted Functional Partners:
AGA26850.1
Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain.
  
     0.611
AGA28934.1
Hypothetical protein.
  
     0.602
AGA24530.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA25655.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA26677.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA28569.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA29584.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA30103.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.591
AGA25826.1
PFAM: Uncharacterised protein family (UPF0236).
  
     0.587
AGA31527.1
Hypothetical protein.
  
     0.563
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.