STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28473.1PFAM: Patatin-like phospholipase. (875 aa)    
Predicted Functional Partners:
AGA28837.1
Putative phosphoesterase or phosphohydrolase.
  
     0.653
AGA28472.1
Hypothetical protein; TIGRFAM: deltaproteobacterial GC-motif protein sorting domain.
       0.628
AGA26487.1
Hypothetical protein.
  
     0.622
AGA25988.1
Hypothetical protein.
  
     0.597
AGA29390.1
Hypothetical protein.
  
     0.596
AGA27206.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.568
AGA31538.1
Hypothetical protein.
  
 
   0.495
AGA30986.1
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; PFAM: Amidase.
  
     0.480
AGA25987.1
Hypothetical protein.
  
     0.473
AGA30331.1
Hypothetical protein.
  
     0.456
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.