STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28482.1G8 domain-containing protein; PFAM: G8 domain. (699 aa)    
Predicted Functional Partners:
AGA27109.1
TIGRFAM: conserved hypothetical protein.
  
     0.740
AGA25195.1
TIGRFAM: conserved hypothetical protein.
  
     0.716
AGA30734.1
TIGRFAM: conserved hypothetical protein.
  
     0.709
AGA25684.1
TIGRFAM: conserved hypothetical protein.
  
     0.696
AGA28483.1
PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
     0.682
AGA31202.1
Hypothetical protein.
  
     0.616
AGA29946.1
PFAM: Calcineurin-like phosphoesterase.
  
  0.611
AGA30207.1
Putative heme-binding domain-containing protein; PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
    0.608
AGA26207.1
Hypothetical protein.
  
     0.606
AGA27401.1
Hypothetical protein.
  
     0.574
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.