STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28522.1Zn-finger-containing protein; PFAM: Zn-finger in ubiquitin-hydrolases and other protein; manually curated; non-canonical start codon. (97 aa)    
Predicted Functional Partners:
AGA28256.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain.
 
  
 0.821
AGA28195.1
Hypothetical protein.
   
 0.767
AGA28780.1
PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain.
   
 0.767
AGA26176.1
Hypothetical protein.
   
 0.614
AGA27685.1
Hypothetical protein.
   
 0.614
AGA29946.1
PFAM: Calcineurin-like phosphoesterase.
    
 
 0.581
AGA28793.1
PFAM: CBS domain; Voltage gated chloride channel.
  
  
 0.434
AGA28861.1
Hypothetical protein (DUF2329); PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Protein of unknown function (DUF3131).
  
   
 0.417
AGA30828.1
Magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase.
   
 
 0.410
AGA24822.1
Kef-type K+ transport system, membrane component; PFAM: Sodium/hydrogen exchanger family.
   
 
 0.402
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.