STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28569.1PFAM: Uncharacterised protein family (UPF0236). (361 aa)    
Predicted Functional Partners:
AGA26487.1
Hypothetical protein.
  
     0.696
AGA27065.1
HEAT repeat-containing protein; PFAM: HEAT repeat.
  
     0.673
AGA27649.1
Ketosteroid isomerase-like protein.
  
     0.636
AGA28589.1
Hypothetical protein.
  
     0.634
AGA26013.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.609
AGA26510.1
Hypothetical protein.
  
     0.606
AGA28417.1
PFAM: Bifunctional DNA primase/polymerase, N-terminal; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain.
  
     0.591
AGA28570.1
Hypothetical protein.
       0.584
AGA29112.1
Putative butyrate kinase; PFAM: Protein of unknown function (DUF1464).
  
     0.559
AGA26402.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase.
  
     0.544
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.