STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28572.1Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. (1048 aa)    
Predicted Functional Partners:
AGA28573.1
Hypothetical protein.
       0.792
AGA28571.1
Transcriptional regulator of sugar metabolism; PFAM: HTH domain.
       0.779
AGA29390.1
Hypothetical protein.
  
     0.727
AGA25988.1
Hypothetical protein.
  
     0.726
AGA31408.1
Hypothetical protein.
  
     0.708
AGA30331.1
Hypothetical protein.
  
     0.685
AGA28232.1
Nucleoside phosphorylase.
  
   
 0.648
AGA29140.1
HEAT repeat-containing protein.
 
     0.613
AGA28837.1
Putative phosphoesterase or phosphohydrolase.
  
     0.601
AGA29023.1
PFAM: Restriction endonuclease.
 
  
 0.596
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.