STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28601.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (593 aa)    
Predicted Functional Partners:
AGA28599.1
Putative glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2.
  
   0.785
AGA28598.1
Hypothetical protein.
  
   0.778
AGA28600.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
       0.773
AGA24592.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.709
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.684
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.681
AGA26183.1
Molecular chaperone; PFAM: von Willebrand factor type A domain; Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.670
AGA28603.1
Putative glycosyltransferase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl transferase family 2.
 
     0.666
AGA26182.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.653
AGA28602.1
Hypothetical protein.
  
   0.606
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.