STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28616.1Negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase. (349 aa)    
Predicted Functional Partners:
AGA24778.1
Hypothetical protein.
  
     0.757
AGA26224.1
Hypothetical protein.
  
     0.723
AGA28615.1
PFAM: NAD dependent epimerase/dehydratase family.
       0.723
AGA26745.1
alpha-L-rhamnosidase family protein; PFAM: Alpha-L-rhamnosidase N-terminal domain.
  
     0.707
AGA30283.1
Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family.
  
     0.680
AGA30764.1
ABC-2 type transporter.
  
     0.675
AGA29188.1
Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family.
  
     0.671
AGA29286.1
Lactoylglutathione lyase-like lyase.
  
     0.671
AGA31372.1
PFAM: Orthopoxvirus protein of unknown function (DUF830).
 
  
 0.668
AGA26200.1
Hypothetical protein.
  
    0.650
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.