STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28642.1Hypothetical protein; PFAM: Putative phosphatase (DUF442). (313 aa)    
Predicted Functional Partners:
AGA28629.1
PFAM: Cytosol aminopeptidase family, N-terminal domain.
  
     0.691
AGA24550.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48; TIGRFAM: MJ0042 family finger-like domain.
  
     0.652
AGA25694.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
     0.635
AGA24728.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA25219.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA26730.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA28072.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA28474.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA28514.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
AGA28583.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.601
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.