STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28762.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (308 aa)    
Predicted Functional Partners:
AGA27313.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
    
0.740
AGA29076.1
ABC-type phosphate/phosphonate transport system, ATPase component; PFAM: ABC transporter; Cyclic nucleotide-binding domain.
 
  
 0.730
AGA28763.1
Hypothetical protein.
       0.623
AGA30451.1
Hypothetical protein.
  
   0.592
AGA25169.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
  
     0.574
AGA29137.1
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component; PFAM: ABC-type uncharacterized transport system.
 
 
 0.573
AGA30059.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
   0.527
AGA30122.1
ABC-2 type transporter.
 
   0.495
AGA30764.1
ABC-2 type transporter.
  
   0.459
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.451
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.