STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28764.1Nuclease-like protein; PFAM: Nuclease-related domain. (337 aa)    
Predicted Functional Partners:
AGA27842.1
Hypothetical protein.
  
     0.751
AGA26539.1
Dienelactone hydrolase family protein.
  
     0.634
AGA30234.1
Hypothetical protein.
  
     0.628
AGA30218.1
acyl-CoA cholesterol acyltransferase; PFAM: MBOAT family.
  
     0.621
AGA28348.1
Hypothetical protein.
  
     0.596
AGA31070.1
Methyltransferase family protein.
  
     0.578
AGA27079.1
Hypothetical protein.
  
     0.564
AGA30024.1
Hypothetical protein.
  
     0.547
AGA28765.1
PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE.
       0.546
AGA26854.1
Hypothetical protein.
  
     0.506
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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