STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28785.1Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain. (296 aa)    
Predicted Functional Partners:
AGA25321.1
Sortase-like acyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
      0.878
AGA28786.1
Hypothetical protein.
       0.676
AGA28787.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
       0.521
AGA29668.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
 
   0.478
AGA28784.1
PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme.
       0.467
AGA26602.1
NADH:ubiquinone oxidoreductase chain G-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region.
 
      0.463
AGA28751.1
PFAM: Pyridoxamine 5'-phosphate oxidase.
 
     0.412
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.