STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28787.1Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family. (125 aa)    
Predicted Functional Partners:
AGA27725.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.725
AGA28170.1
PFAM: Bacterial regulatory protein, arsR family.
  
     0.718
AGA29419.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.688
AGA31101.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.677
AGA28786.1
Hypothetical protein.
  
  
 0.584
AGA28785.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.521
AGA28788.1
Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
       0.509
AGA28789.1
Cytochrome bd-type quinol oxidase, subunit 2; PFAM: Cytochrome oxidase subunit II.
       0.509
AGA24719.1
Putative transcriptional regulator.
  
     0.428
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.