STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28790.1PFAM: Domain of Unknown Function (DUF1080). (278 aa)    
Predicted Functional Partners:
AGA29759.1
PFAM: Domain of Unknown Function (DUF1080).
 
     0.914
AGA29371.1
PFAM: Domain of Unknown Function (DUF1080).
  
     0.736
AGA31347.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.726
AGA27248.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.722
AGA27011.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.715
AGA30135.1
PFAM: Domain of Unknown Function (DUF1080).
  
     0.695
AGA29844.1
PFAM: Domain of Unknown Function (DUF1080).
  
     0.694
AGA27057.1
Putative membrane-bound dehydrogenase; PFAM: Cytochrome c; Trehalose utilisation; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.680
AGA26658.1
PFAM: Domain of Unknown Function (DUF1080).
  
     0.673
AGA27104.1
Putative membrane-bound dehydrogenase; PFAM: Cytochrome c; Trehalose utilisation; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.671
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.