STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28803.1DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family. (1337 aa)    
Predicted Functional Partners:
AGA30371.1
PFAM: Proteins of 100 residues with WXG.
 
 
 
 0.937
AGA28802.1
Hypothetical protein.
       0.787
AGA28933.1
Putative glucan synthasis protein; PFAM: SMI1 / KNR4 family.
   
 
 0.732
AGA30250.1
Cell division septal protein; PFAM: POTRA domain, FtsQ-type.
   
 
 0.666
AGA27739.1
Hypothetical protein.
  
   
 0.574
AGA28801.1
Hypothetical protein.
       0.565
AGA30697.1
Hypothetical protein.
  
     0.561
AGA27741.1
PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
  
     0.546
AGA28900.1
Hypothetical protein.
  
     0.546
AGA27740.1
Hypothetical protein.
  
     0.540
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.