STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28837.1Putative phosphoesterase or phosphohydrolase. (236 aa)    
Predicted Functional Partners:
AGA25988.1
Hypothetical protein.
  
     0.772
AGA26487.1
Hypothetical protein.
  
     0.769
AGA29390.1
Hypothetical protein.
  
     0.768
AGA30331.1
Hypothetical protein.
  
     0.754
AGA25178.1
PFAM: Chalcone-flavanone isomerase.
  
     0.753
AGA29272.1
Type II secretory pathway, component PulD; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
     0.750
AGA27649.1
Ketosteroid isomerase-like protein.
  
     0.730
AGA26408.1
ABC-type Fe3+ transport system, permease component.
  
     0.720
AGA26381.1
Hypothetical protein.
  
     0.711
AGA26309.1
Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.707
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.