STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28839.1Small integral membrane protein; PFAM: Protein of unknown function (DUF1328). (57 aa)    
Predicted Functional Partners:
AGA25395.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.767
AGA26346.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.760
AGA28838.1
Hypothetical protein.
       0.524
AGA26063.1
Late embryogenesis abundant protein.
  
    0.475
AGA26358.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
    0.475
AGA26903.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
    0.475
AGA27256.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
    0.475
AGA28368.1
PFAM: Putative phospholipid-binding domain.
  
    0.475
AGA29522.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
    0.475
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.