STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28873.1PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain. (692 aa)    
Predicted Functional Partners:
AGA28874.1
PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family.
 
  
 0.979
AGA28876.1
PFAM: SpoVR like protein.
 
  
 0.979
AGA28269.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
   
    0.682
AGA26740.1
PFAM: Aldo/keto reductase family.
   
    0.655
AGA28914.1
PFAM: Aldo/keto reductase family.
   
    0.655
AGA28185.1
Putative membrane protein; PFAM: Catalase; Protein of unknown function (DUF1304).
   
  
 0.618
AGA28109.1
PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV.
   
    0.598
AGA25193.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
   
    0.459
AGA30894.1
Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein.
   
    0.459
AGA25400.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.428
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.