STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA28892.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (637 aa)    
Predicted Functional Partners:
AGA26183.1
Molecular chaperone; PFAM: von Willebrand factor type A domain; Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.692
AGA26182.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.690
AGA24592.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
 0.680
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.669
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.667
AGA31109.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: amino acid adenylation domain.
  
 
 0.543
AGA28038.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: Peptidase C39 family.
   
   0.541
AGA29771.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: Peptidase C39 family.
   
   0.541
AGA27788.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ C terminal region; DnaJ domain.
  
 
 
 0.527
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
 
   0.504
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.